Design of a scan generator for Scanning TEM
In this post we are designing a scan generator for a Scanning Transmission Electron Microscope, also known as STEM.
Berk Küçükoğlu
Researcher / HAM Radio Enthusiast / Electronics Tinkerer / On a quest to find non-scientific hobbies
Welcome! I’m Berk, a passionate PhD student at the intersection of electron microscopy, data science, and computational imaging. My research focuses on pushing the boundaries of biological imaging through innovative techniques like ptychography.
Curious about my journey? Explore my About page to learn more about my academic background and research interests. For a deep dive into my latest projects and insights, check out my Blog. From cutting-edge microscopy techniques to data analysis breakthroughs, I share it all there.
Looking for specific tools or resources? Head over to my Tools section, where I showcase software and methods I’ve developed. And if you’re interested in my published work, you can find a comprehensive list on my Publications page.
Feel free to connect with me if you have any questions or potential collaborations!
Research related
My research is mainly related to cryo-EM and diffractive imaging. Find everything about cool cryo-EM stuff
GHI Estimation with Neural Networks
We won the EPFL MICRO-573 course competition! Using raw images from two cameras, we estimate the Global Horizontal Irradiance
Recent Posts
Derivation of the optical 2α limit
In this post we are starting with a single lens imaging system, and derive the famous 2α diffraction limit. We take the steps necessary.
GHI estimation using Neural Networks
We won the course competition for designing a Neural Network. Here I share the details of our network design.
Designing a PIC32 board from scratch
In this post, we are designing a PIC32 board from scratch.
Designing a dsPIC board from scratch
In this post, we are designing a dsPIC board from scratch.
Tutorial on designing a digital filter
In this post, I am sharing what I learned from Levent Onural on designing a digital filter. I wanted this to be in his memory
Implementing and improving a Psuedo White Noise Generator
In this post, we are improving upon an existing white noise generator design.
DSP on a Basys3 Board
In this post, we are designing a digital signal processing circuit on a Basys3 board. We aim the circuit to run in real-time.